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CAMEL2: Enhancing weakly supervised learning for histopathology images by incorporating the significance ratio

arXiv.org Artificial Intelligence

Histopathology image analysis plays a crucial role in cancer diagnosis. However, training a clinically applicable segmentation algorithm requires pathologists to engage in labour-intensive labelling. In contrast, weakly supervised learning methods, which only require coarse-grained labels at the image level, can significantly reduce the labeling efforts. Unfortunately, while these methods perform reasonably well in slide-level prediction, their ability to locate cancerous regions, which is essential for many clinical applications, remains unsatisfactory. Previously, we proposed CAMEL, which achieves comparable results to those of fully supervised baselines in pixel-level segmentation. However, CAMEL requires 1,280x1,280 image-level binary annotations for positive WSIs. Here, we present CAMEL2, by introducing a threshold of the cancerous ratio for positive bags, it allows us to better utilize the information, consequently enabling us to scale up the image-level setting from 1,280x1,280 to 5,120x5,120 while maintaining the accuracy. Our results with various datasets, demonstrate that CAMEL2, with the help of 5,120x5,120 image-level binary annotations, which are easy to annotate, achieves comparable performance to that of a fully supervised baseline in both instance- and slide-level classifications.


Designing a Deep Learning-Driven Resource-Efficient Diagnostic System for Metastatic Breast Cancer: Reducing Long Delays of Clinical Diagnosis and Improving Patient Survival in Developing Countries

arXiv.org Artificial Intelligence

Breast cancer is one of the leading causes of cancer mortality. Breast cancer patients in developing countries, especially sub-Saharan Africa, South Asia, and South America, suffer from the highest mortality rate in the world. One crucial factor contributing to the global disparity in mortality rate is long delay of diagnosis due to a severe shortage of trained pathologists, which consequently has led to a large proportion of late-stage presentation at diagnosis. The delay between the initial development of symptoms and the receipt of a diagnosis could stretch upwards 15 months. To tackle this critical healthcare disparity, this research has developed a deep learning-based diagnosis system for metastatic breast cancer that can achieve high diagnostic accuracy as well as computational efficiency. Based on our evaluation, the MobileNetV2-based diagnostic model outperformed the more complex VGG16, ResNet50 and ResNet101 models in diagnostic accuracy, model generalization, and model training efficiency. The visual comparisons between the model prediction and ground truth have demonstrated that the MobileNetV2 diagnostic models can identify very small cancerous nodes embedded in a large area of normal cells which is challenging for manual image analysis. Equally Important, the light weighted MobleNetV2 models were computationally efficient and ready for mobile devices or devices of low computational power. These advances empower the development of a resource-efficient and high performing AI-based metastatic breast cancer diagnostic system that can adapt to under-resourced healthcare facilities in developing countries. This research provides an innovative technological solution to address the long delays in metastatic breast cancer diagnosis and the consequent disparity in patient survival outcome in developing countries.


Cancer-Spotting AI Is Vulnerable To Cyberattacks

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Artificial intelligence (AI) models that evaluate medical images have potential to speed up and improve accuracy of cancer diagnoses, but they may also be vulnerable to cyberattacks. In a new study, University of Pittsburgh researchers simulated an attack that falsified mammogram images, fooling both an AI breast cancer diagnosis model and human breast imaging radiologist experts. The study, published today in Nature Communications, brings attention to a potential safety issue for medical AI known as "adversarial attacks," which seek to alter images or other inputs to make models arrive at incorrect conclusions. "What we want to show with this study is that this type of attack is possible, and it could lead AI models to make the wrong diagnosis -- which is a big patient safety issue," said senior author Shandong Wu, Ph.D., associate professor of radiology, biomedical informatics and bioengineering at Pitt. "By understanding how AI models behave under adversarial attacks in medical contexts, we can start thinking about ways to make these models safer and more robust." AI-based image recognition technology for cancer detection has advanced rapidly in recent years, and several breast cancer models have U.S. Food and Drug Administration (FDA) approval.


Machine Learning Method Allows Hospitals to Share Patient Data Privately

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Penn Medicine researchers used federated learning to train an algorithm to analyze magnetic resonance imaging scans of brain tumor patients to distinguish healthy brain tissue from cancerous regions. Researchers at the University of Pennsylvania's Perelman School of Medicine, in conjunction with the University of Texas MD Anderson Cancer Center, Washington University, and the Hillman Cancer Center at the University of Pittsburgh, have developed a machine learning method that can facilitate the sharing of patient data without compromising privacy. The model uses the federated learning approach that trains an algorithm across multiple decentralized devices or servers containing local data samples without exchanging them. The researchers found the approach to be successful in analyzing magnetic resonance imaging (MRI) scans and distinguishing between healthy brain tissue and cancerous regions. The model could allow doctors in hospitals worldwide to input their own patient brain scans, which would support the development of a concensus model that would be clinically useful.


Can Machines Really Tell Us If We're Sick?

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This week US scientists announced they have developed an algorithm, or a computerised tool, to identify skin cancers through analysis of photographs. Rather than relying on human eyes, the new method scans a photo of a patch of skin to look for common and dangerous forms of skin cancer. The authors report their approach performs on par with board-certified dermatologists to distinguish two forms of cancer, keratinocyte carcinoma and malignant melanoma, from benign skin lesions. The skin cancer diagnostic tool is based on a powerful type of machine learning that extracts information from images. The critical factor in achieving the accuracy and reliability required for a medical diagnostic tool is the large volume of training data the authors have used. This data consists of 129,450 skin images, and a label for each which indicates whether it contains a cancerous region.